MiNiNeuronPara (ERNST API)

java.lang.Object
- cnslab.cnsnetwork.MiNiNeuronPara

All Implemented Interfaces:

Para
```
public final class MiNiNeuronPara
extends Object
implements Para
```
MiNiNeuron neuron parameters.

Version:

$Date: 2012-08-04 13:43:22 -0500 (Sat, 04 Aug 2012) $ $Rev: 104 $ $Author: croft $

Author:

Yi Dong, David Wallace Croft, M.Sc., Jeremy Cohen

Field Summary

Fields
Modifier and Type	Field and Description
`double`	`A` Adaptation see Mihalas, Niebur 2009
`double`	`ABSREF` absolute refractory period
`double[][]`	`allDecays` all state variables' decays
`double`	`Alpha_LTD` weight of strength of LTD
`double`	`Alpha_LTP` weight of strength of LTP (e.g. best timed spike doublet changes the synapse by 1%)
`double`	`B` Adaptation see Mihalas, Niebur 2009
`double`	`CAP` capacitance of the neuron farad
`double[]`	`DECAY_SPIKE` Decay rates for spike-induced currents (inverse time constant)
`double[]`	`DECAY_SYNAPSE` Decay rates for synaptic currents (inverse time constant)
`double`	`GL` leak conductance siemens
`double`	`IEXT` external constant current
`double`	`ini_mem` initial membrane voltage
`double`	`ini_memVar` initial membrane voltage jitter, uniformly distributed.
`double[]`	`ini_spike_curr` Initial spike induced currents
`double`	`ini_threshold` initial voltage threshold
`double`	`K_LTD` LTD inverse time constant
`double`	`K_LTP` LTP inverse time constant
`double`	`MEMBRANE_VOLTAGE_BASE` constant for membrane voltage
`double`	`NB_BASE` the base of the NB term
`double`	`NG_BASE` the base of the NG term
`double`	`REFCURR` refractory current
`double`	`RRESET`
`double[]`	`SPIKE_ADD` Additive resets for spike-induced currents
`double[]`	`SPIKE_CURRENT_TO_NB` Conversion factor between a spike current and the NB term.
`double[]`	`SPIKE_CURRENT_TO_NG` Conversion factor between a spike current and the NG term.
`double[]`	`SPIKE_CURRENT_TO_SPIKE_NJ` Conversion factor between a spike current and a spike NJ term.
`double[]`	`SPIKE_RATIO` Multiplicative resets for spike-induced currents
`double[]`	`SYNAPSE_CURRENT_TO_NB` Conversion factor between a synapse current and the NB term.
`double[]`	`SYNAPSE_CURRENT_TO_NG` Conversion factor between a synapse current and the NG term.
`double[]`	`SYNAPSE_CURRENT_TO_SYNAPSE_NJ` Conversion factor between a synapse current and a synapse NJ term.
`double`	`THRESHOLD` threshold potential V (theta infinity in the paper)
`double`	`THRESHOLD_DIFF_BASE` constant for threshold gap (membrane voltage - threshold)
`double`	`THRESHOLD_TO_NB` Conversion factor between the threshold and the NB term.
`double`	`THRESHOLDADD` Change of threshold when neuron fires
`double`	`VOLTAGE_TO_NB` Conversion factor between the voltage and the NB term.
`double`	`VOLTAGE_TO_NG` Conversion factor between the voltage and the NG term.
`double[]`	`VOLTAGE_TO_SPIKE_NJ` Conversion factor between the voltage and a spike NJ term.
`double[]`	`VOLTAGE_TO_SYNAPSE_NJ` Conversion factor between the voltage and a synapse NJ term.
`double`	`VRESET` reset potential V
`double`	`VREST` resting potential V

Constructor Summary

Constructors
Constructor and Description

MiNiNeuronPara()

Constructors
Constructor and Description
`MiNiNeuronPara()`

Method Summary

Methods
Modifier and Type Method and Description

void calConstants()
Pre-calculate constants.

String getModel()
- Methods inherited from class java.lang.Object
  clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods
Modifier and Type	Method and Description
`void`	`calConstants()` Pre-calculate constants.
`String`	`getModel()`

- Field Detail
  - CAP
```
public double CAP
```
    capacitance of the neuron farad
  - GL
```
public double GL
```
    leak conductance siemens
  - VRESET
```
public double VRESET
```
    reset potential V
  - VREST
```
public double VREST
```
    resting potential V
  - THRESHOLD
```
public double THRESHOLD
```
    threshold potential V (theta infinity in the paper)
  - REFCURR
```
public double REFCURR
```
    refractory current
  - THRESHOLDADD
```
public double THRESHOLDADD
```
    Change of threshold when neuron fires
  - RRESET
```
public double RRESET
```
  - A
```
public double A
```
    Adaptation see Mihalas, Niebur 2009
  - B
```
public double B
```
    Adaptation see Mihalas, Niebur 2009
  - DECAY_SYNAPSE
```
public double[] DECAY_SYNAPSE
```
    Decay rates for synaptic currents (inverse time constant)
  - DECAY_SPIKE
```
public double[] DECAY_SPIKE
```
    Decay rates for spike-induced currents (inverse time constant)
  - SPIKE_ADD
```
public double[] SPIKE_ADD
```
    Additive resets for spike-induced currents
  - SPIKE_RATIO
```
public double[] SPIKE_RATIO
```
    Multiplicative resets for spike-induced currents
  - ini_spike_curr
```
public double[] ini_spike_curr
```
    Initial spike induced currents
  - IEXT
```
public double IEXT
```
    external constant current
  - ABSREF
```
public double ABSREF
```
    absolute refractory period
  - ini_mem
```
public double ini_mem
```
    initial membrane voltage
  - ini_memVar
```
public double ini_memVar
```
    initial membrane voltage jitter, uniformly distributed.
  - ini_threshold
```
public double ini_threshold
```
    initial voltage threshold
  - Alpha_LTD
```
public double Alpha_LTD
```
    weight of strength of LTD
  - Alpha_LTP
```
public double Alpha_LTP
```
    weight of strength of LTP (e.g. best timed spike doublet changes the synapse by 1%)
  - K_LTD
```
public double K_LTD
```
    LTD inverse time constant
  - K_LTP
```
public double K_LTP
```
    LTP inverse time constant
  - MEMBRANE_VOLTAGE_BASE
```
public double MEMBRANE_VOLTAGE_BASE
```
    constant for membrane voltage
  - THRESHOLD_DIFF_BASE
```
public double THRESHOLD_DIFF_BASE
```
    constant for threshold gap (membrane voltage - threshold)
  - NB_BASE
```
public double NB_BASE
```
    the base of the NB term
  - NG_BASE
```
public double NG_BASE
```
    the base of the NG term
  - allDecays
```
public double[][] allDecays
```
    all state variables' decays
  - SPIKE_CURRENT_TO_SPIKE_NJ
```
public double[] SPIKE_CURRENT_TO_SPIKE_NJ
```
    Conversion factor between a spike current and a spike NJ term. Used when adding a spike current to a spike NJ term and when accessing a spike current from a spike NJ term.
  - SPIKE_CURRENT_TO_NG
```
public double[] SPIKE_CURRENT_TO_NG
```
    Conversion factor between a spike current and the NG term. Used when changing a spike current in the NG term.
  - SPIKE_CURRENT_TO_NB
```
public double[] SPIKE_CURRENT_TO_NB
```
    Conversion factor between a spike current and the NB term. Used when changing a spike current in the NB term.
  - VOLTAGE_TO_SPIKE_NJ
```
public double[] VOLTAGE_TO_SPIKE_NJ
```
    Conversion factor between the voltage and a spike NJ term. Used when accessing the voltage from a spike NJ term.
  - SYNAPSE_CURRENT_TO_SYNAPSE_NJ
```
public double[] SYNAPSE_CURRENT_TO_SYNAPSE_NJ
```
    Conversion factor between a synapse current and a synapse NJ term. Used when adding a synapse current to a synapse NJ term and when accessing a synapse current from a synapse NJ term.
  - SYNAPSE_CURRENT_TO_NG
```
public double[] SYNAPSE_CURRENT_TO_NG
```
    Conversion factor between a synapse current and the NG term. Used when changing a synapse current in the NG term.
  - SYNAPSE_CURRENT_TO_NB
```
public double[] SYNAPSE_CURRENT_TO_NB
```
    Conversion factor between a synapse current and the NB term. Used when changing a synapse current in the NB term.
  - VOLTAGE_TO_SYNAPSE_NJ
```
public double[] VOLTAGE_TO_SYNAPSE_NJ
```
    Conversion factor between the voltage and a synapse NJ term. Used when accessing the voltage from a synapse NJ term.
  - VOLTAGE_TO_NG
```
public double VOLTAGE_TO_NG
```
    Conversion factor between the voltage and the NG term. Used when changing voltage in the NG term and when accessing the voltage from the NG term.
  - VOLTAGE_TO_NB
```
public double VOLTAGE_TO_NB
```
    Conversion factor between the voltage and the NB term. Used when changing the voltage in the NB term.
  - THRESHOLD_TO_NB
```
public double THRESHOLD_TO_NB
```
    Conversion factor between the threshold and the NB term. Used when changing the threshold in the NG term.
- Constructor Detail
  - MiNiNeuronPara
```
public MiNiNeuronPara()
```
- Method Detail
  - getModel
```
public String getModel()
```
    Specified by:
    
    getModel in interface Para
  - calConstants
```
public void calConstants()
```
    Pre-calculate constants.

Class MiNiNeuronPara

Field Summary

Constructor Summary

Method Summary

Methods inherited from class java.lang.Object

Field Detail

CAP

GL

VRESET

VREST

THRESHOLD

REFCURR

THRESHOLDADD

RRESET

A

B

DECAY_SYNAPSE

DECAY_SPIKE

SPIKE_ADD

SPIKE_RATIO

ini_spike_curr

IEXT

ABSREF

ini_mem

ini_memVar

ini_threshold

Alpha_LTD

Alpha_LTP

K_LTD

K_LTP

MEMBRANE_VOLTAGE_BASE

THRESHOLD_DIFF_BASE

NB_BASE

NG_BASE

allDecays

SPIKE_CURRENT_TO_SPIKE_NJ

SPIKE_CURRENT_TO_NG

SPIKE_CURRENT_TO_NB

VOLTAGE_TO_SPIKE_NJ

SYNAPSE_CURRENT_TO_SYNAPSE_NJ

SYNAPSE_CURRENT_TO_NG

SYNAPSE_CURRENT_TO_NB

VOLTAGE_TO_SYNAPSE_NJ

VOLTAGE_TO_NG

VOLTAGE_TO_NB

THRESHOLD_TO_NB

Constructor Detail

MiNiNeuronPara

Method Detail

getModel

calConstants